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The 15 Best Ecommerce Inventory Management Software Solutions

Jonny Parker
June 25, 2025

An eCommerce business should be like a well-oiled machine. There’s an attractive and responsive website, an efficient fulfillment model, and a point-of-sale (POS) system that offers stock visibility. 

But then, a shopper spends 30 minutes mulling over a product. And when they finally click the “buy” button, they get an email a day later saying the item is out of stock. This frustration leads to missed sales and even bad reviews.

Many common eCommerce inventory management methods lack the features a growing business needs to satisfy customers and stay competitive. Modern online retailers need modern solutions — a platform that can handle fulfillment, real-time inventory tracking, and centralized order management all in one place.

Let’s explore 15 ecommerce inventory management software solutions that fit the bill.

What is ecommerce inventory management software?

Ecommerce inventory management software is a digital solution that helps online retailers organize and control stock across multiple sales channels. Instead of relying on disconnected spreadsheets or other systems, ecommerce businesses use this software to manage inventory from a single, centralized dashboard.

These systems provide real-time inventory counts, barcode scanning, automated stock updates, and multi-location tracking. This allows you to monitor incoming shipments and outgoing orders with greater precision.

Some ecommerce inventory management software integrates with platforms like Amazon and Shopify, so you can sync product listings and inventory data automatically. Others, like Fishbowl, go a step further by integrating with accounting, 3PL, and CRM software to create a more cohesive supply chain ecosystem.

Altogether, these features streamline multichannel operations. Tracking all your inventory in one place means you can keep fulfillment running smoothly — no matter what platform orders come from.

Key features of inventory management software

Here are some of the features to prioritize when choosing a software solution for your ecommerce store:

  • Forecasting and reporting: Find a platform that offers customizable reports and forecasting tools to help you make informed decisions.
  • Real-time inventory tracking: Accurate, up-to-the-minute inventory data is a must for optimizing stock levels and preventing stockouts.
  • Multi-channel integration: If you sell on multiple platforms — both Amazon and eBay, for example — make sure the software seamlessly integrates with all of them.
  • Automated replenishment: Look for a platform that can analyze sales trends, set reorder points, and generate purchase orders automatically. This saves time and resources.
  • Order management and fulfillment: Some platforms, like Fishbowl, do more than just manage inventory. The best solutions can also process orders, generate shipping labels, and easily track shipments in one place.
  • Scalability: As your business grows, so will your inventory management needs. Pick a platform that accommodates increasing sales volume and product complexity.

The benefits of eCommerce inventory management software for businesses

A basic spreadsheet or POS system may have the inventory capabilities to get a business off the ground. But here’s what you can gain from upgrading to a comprehensive inventory management software solution.

Real-time inventory tracking

The best inventory management systems don’t require time-consuming inventory counts or error-prone manual data entry. A good software program offers up-to-the-minute insights into stock levels across all sales channels, preventing overselling and stockouts. You also access the information needed to make strategic choices about reordering and promotions.

Automated replenishment

Having the right products in stock at the right time minimizes the risks of stockouts and lost sales. Smart software can analyze sales trends, set reorder points, and even automate purchase orders with suppliers to keep your warehouse stocked. 

Centralized order management

When you use multiple sales channels, order processing and fulfillment have to keep up. Inventory management software centralizes order information, allowing you to track orders, manage shipping, and handle returns all from a single platform — no more disappointed customers.

Improved forecasting and planning

Inventory management platforms offer valuable insights into sales patterns and customer behavior. They generate detailed reports and forecasts that help anticipate demand, plan for seasonal fluctuations, and optimize inventory levels to reduce the carrying costs that come from overstocking.

Enhanced customer satisfaction 

When a customer isn’t happy with an order, they’re unlikely to become a repeat buyer — and they might even leave a damaging review. By preventing stockouts, speeding up order fulfillment, and providing accurate product information, inventory management software provides a positive shopping experience that keeps customers coming back for more.

Common challenges of ecommerce inventory management software

Managing inventory with software solves a lot of problems, but it’s not always smooth sailing. Here are four common challenges ecommerce retailers may run into when using inventory management platforms:

  1. Integration issues: Not all inventory systems play nicely with every platform. Retailers may encounter compatibility problems when trying to connect their software to ecommerce sites, marketplaces, accounting tools, or shipping solutions. Poor integration also leads to data silos and manual workarounds that eat up time and increase errors.
  2. Steep learning curve: Some inventory systems are more complex than others. Without proper onboarding and training, your team may struggle to navigate such software or use it to its full potential — leaving valuable features untouched or misused.
  3. High costs: Many platforms offer tiered pricing, and essential tools like forecasting, automation, and analytics may only be available on higher-tier plans. These costs add up quickly, and they effectively price out small and mid-sized businesses.
  4. Limited customization: Inventory management software is meant to speed things up, but overly rigid systems tend to slow things down. Some inventory tools aren’t flexible enough to adapt to a retailer’s specific workflows or product types, which makes it harder to streamline operations.

5 things to consider when choosing ecommerce inventory management software

The inventory management software you select shapes business efficiency. The right platform should align with your current needs and future goals. 

Here are five key factors to keep in mind as you make your decision:

  1. Channel integrations: Make sure the software integrates with your existing sales channels and the tools you already use for accounting, shipping, and customer management. Smooth integration keeps data consistent and reduces manual work.
  2. Real-time inventory tracking: Look for platforms that offer accurate, real-time inventory updates. This helps you avoid overselling and stockouts, which lead to fulfillment delays (especially when selling across multiple channels).
  3. Ease of use: A user-friendly interface makes a big difference in day-to-day operations. If the system is too complicated, your team may struggle to adopt it or waste time on repetitive tasks.
  4. Scalability: Choose a solution that grows with your business. That includes handling more SKUs, locations, users, orders, and analytical needs as your operation expands.
  5. Automation and reporting tools: Advanced features like low-stock alerts, reorder automation, and sales analytics give you more control over your inventory and lead to smarter strategic decisions.

The 15 best inventory management platforms for ecommerce

It’s easy to see why inventory management solutions are game-changers. What’s not so easy is choosing one. Here’s a list of the best platforms to help you decide.

1. Fishbowl

Fishbowl is a comprehensive inventory management solution designed to streamline operations for manufacturing, wholesale, and ecommerce businesses. It offers top-tier features and seamless integration with popular platforms, making it a game-changer for all kinds of businesses.

Key features

  • Integrations with QuickBooks, shipping and dropshipping partners, and ecommerce marketplaces, among others
  • Robust asset and inventory tracking
  • Manufacturing and warehouse management
  • Barcode scanning via mobile app
  • Cloud-based or on-premises solutions

Pricing

Fishbowl starts at $329/month.

Pros

There are comprehensive features and a user-friendly interface. It’s perfect for manufacturing, wholesale, and ecommerce businesses alike. QuickBooks users find it to be an ideal inventory integration with their accounting platform.

Cons

Fishbowl is a bigger investment than others on this list.

2. Zoho Inventory

Zoho Inventory is a user-friendly, customizable inventory management solution that seamlessly integrates with the Zoho ecosystem, offering multi-channel management and support for product variations.

Key features

  • Customization
  • Multi-channel inventory management
  • Batch tracking and product variants

Pricing

Zoho Inventory starts at $29/month.

Pros

It’s easy to bundle with other Zoho apps.

Cons

Customization capabilities come with a learning curve. Zoho also doesn’t support tracking bin locations or aisles, which means it’s not ideal for larger or more complex businesses.

3. inFlow Inventory

inFlow is an intuitive inventory management solution that simplifies real-time tracking and barcode scanning. It’s a good choice for businesses that value simple implementation and ease of use over advanced features.

Key features

  • Real-time inventory tracking
  • Intuitive barcode scanning

Pricing

inFlow starts at $89/month.

Pros

It’s easy to learn, and there are no setup fees.

Cons

The fees are expensive, and there aren’t many integrations.

4. Shopify

Shopify is a popular ecommerce platform that offers built-in inventory management tools, multi-channel selling capabilities, and integration with more advanced inventory management platforms like Fishbowl. There’s also an extensive app store for added functionality.

Key features

  • Multi-warehouse management
  • Serial and batch tracking
  • Invoice creation and tracking

Pricing

Shopify starts at $29/month.

Pros

Shopify’s ecommerce tools are easy to use, especially for small businesses already using Shopify’s website-building software.

Cons

Inventory features are limited, and you need additional apps for maximum usability.

5. BigCommerce

BigCommerce is a scalable ecommerce platform with built-in inventory management features and no transaction fees, which can be a big perk for businesses with high sales volumes.

Key features

  • Omnichannel inventory syncing
  • Simplified stock tracking and changes
  • Centralized order processing

Pricing

BigCommerce starts at $29/month.

Pros

BigCommerce is known for its scalability. 

Cons

It’s complex to set up.

6. Katana

Katana is a specialized inventory management solution for manufacturing businesses. It offers real-time master planning, shop floor control, and production planning capabilities.

Key features

  • Manufacturing inventory and production planning
  • Real-time master planning
  • Shop floor control

Pricing

Katana starts at $179/month.

Pros

This software is ideal for make-to-order and custom manufacturing businesses.

Cons

Katana may be overkill for businesses without complex manufacturing processes.

7. Cin7

Cin7 is a powerful inventory and order management platform geared toward wholesale and distribution businesses.

Key features

  • Order fulfillment
  • B2B ecommerce
  • Third-party logistics (3PL) integration

Pricing

Cin7 starts at $349/month.

Pros

Its powerful features are suitable for wholesale and distribution businesses.

Cons

Cin7 is a bit technical, and it’s at a higher price point than other options.

8. WooCommerce

WooCommerce is an open-source ecommerce platform that provides flexibility and customization options. While it’s not a standalone inventory management tool, WooCommerce offers multiple extensions for tracking and managing inventory.

Key features

  • Free to download and use
  • A variety of inventory management extensions to choose from
  • Customizability  

Pricing

The core plugin is free, and extensions vary in price.

Pros

WooCommerce is highly flexible and a good option for tech-savvy businesses. It’s also the official ecommerce solution for WordPress, which means it’s easy to integrate with existing WordPress sites.

Cons

Managing extensions can be complex, and not everyone has the technical expertise.

9. Sellercloud

Sellercloud is a robust multi-channel inventory and order management platform designed for high-volume sellers, offering features like warehouse management and shipping integration.

Key features

  • Predictive purchasing and restocking
  • Custom and pre-made reports
  • Inventory reserves to prevent overselling

Pricing

Sellercloud starts at $1,199/month.

Pros

Its robust features handle high-volume sales across multiple channels.

Cons

Sellercloud is technologically advanced, and its high price point reflects its complexity.

10. ShipBob

ShipBob is a 3PL provider that offers outsourced fulfillment services, inventory distribution, and a two-day shipping network. 

Key features

  • Real-time inventory levels
  • Reorder points and notifications to prevent stockouts
  • Integration with various ecommerce platforms

Pricing

Pricing varies depending on your preferences.

Pros

ShipBob is ideal for businesses that want to outsource fulfillment.

Cons

You have less control over the fulfillment process. Pricing varies depending on usage, so it’s difficult to budget for.

11. Helcim

Although Helcim’s pricing varies based on a business’s volume and the type of transaction, the platform’s affordability stands out. It also combines inventory management with POS and payment processing capabilities, making it a top contender for companies looking for an all-in-one system.

Key features

  • Data syncs across all sales channels
  • App and card reader work across all devices
  • Low stock alerts

Pricing

There’s no monthly fee. Price varies based on usage and volume.

Pros

Helcim is affordable and ideal for businesses that need both inventory management and POS capabilities.

Cons

Features may not be enough for larger or more complex businesses.

12. Veeqo

Veeqo is a user-friendly multi-channel inventory and order management platform designed for businesses selling across various channels. It offers shipping integrations, warehouse management features, and custom reports.

Key features

  • Built-in barcode scanning
  • Digital picking
  • Low stock alerts

Pricing

Veeqo is free, though there’s a $250/month paid option for greater capabilities.

Pros

It’s user-friendly and good for businesses selling across multiple channels.

Cons

The free option is limited, and the paid plan may be expensive for smaller businesses. You also have to ship at least 50% of your orders with one of Veeqo’s partners, which include UPS, Amazon Shipping, and FedEx.

13. Sortly

Sortly offers a simple, visual approach to inventory management, helping you track assets and organize inventory with photos and custom tags.

Key features

  • Custom tags, QR/barcode scanning
  • Mobile app with offline access
  • Photo-based inventory tracking

Pricing

Sortly uses a tiered pricing system that starts with a free plan. Other tiers range from $24 to $149 per month, with custom pricing available for enterprises.

Pros

The visual interface and mobile app make inventory tracking convenient, especially for small teams or businesses with field operations.

Cons

Some users find the interface confusing, and others report irretrievably losing data due to system updates.

14. Netstock

Netstock is an inventory optimization tool built to improve forecasting. It integrates with existing ERP or inventory systems rather than serving as a standalone inventory manager.

Key features

  • Demand forecasting and automated replenishment
  • Inventory performance dashboards
  • Multi-warehouse planning

Pricing

Pricing depends on business requirements.

Pros

Forecasting tools support more efficient inventory management by reducing overstock and stockouts.

Cons

Netstock has a steep learning curve, and some users say it’s not customizable enough to fit their needs. And since Netstock is primarily a planning tool, it requires integration with other systems for full inventory management capabilities.

15. Odoo

Odoo is a modular business management platform that includes inventory management among its many apps. It suits businesses that want an all-in-one system combining inventory with sales, accounting, and manufacturing.

Key features

  • Real-time inventory tracking
  • Automated replenishment
  • Warehouse optimization

Pricing

If you only want one Odoo app — like the inventory app — you can get it for free. Access to Odoo’s full suite of apps starts at $24.90 per month.

Pros

Odoo is highly flexible and scalable for businesses needing a unified system. It’s basically a bargain ERP.

Cons

Add-on features are priced separately, so costs can escalate quickly. It doesn’t integrate with QuickBooks, instead offering its own accounting app, which many users struggle to learn. 

Elevate your ecommerce business with Fishbowl

One of the smartest moves you can make for a growing ecommerce business is investing in the right tools. And few inventory management software solutions can handle the job as easily and thoroughly as Fishbowl.

Fishbowl is the all-in-one inventory management solution designed to help you control stock, manage product listings, and even synchronize online sales with stock levels and accounting records in QuickBooks. For maximum customizability and efficiency, Fishbowl also integrates with many of the software solutions above, including BigCommerce, Shopify, and WooCommerce.

Are you ready to take control of your stock and gain end-to-end visibility over your ecommerce operations? Schedule a demo.

FAQs

How can inventory management for resellers be optimized?

Resellers can optimize inventory by centralizing stock tracking in one platform, like Fishbowl. This helps you keep all sales channels synced accurately. Another strategy is to automate reorder points to avoid running out of stock or overstocking — Fishbowl can help with that, too.

Which inventory and purchasing software is recommended for small businesses?

Small businesses benefit from software that’s affordable, scalable, and easy to use. Fishbowl is a solid choice. Fishbowl combines robust inventory and purchasing features with integration options that streamline accounting and supply chain management.

What are the benefits of using enterprise inventory software?

Enterprise inventory software like Fishbowl provides advanced tracking, multi-location management, and seamless integration with accounting and logistics systems in one platform. This enables larger businesses to handle complex operations with accuracy and improved supply chain visibility. Plus, small businesses can scale up with Fishbowl rather than having to switch systems once they outgrow a smaller inventory solution’s limited feature set.

What inventory management software is ideal for Amazon sellers?

Amazon sellers need software that syncs listings, tracks inventory in real time, and prevents overselling. Many turn to Fishbowl. Fishbowl integrates with major marketplaces like Amazon to offer centralized inventory control, which keeps your ecommerce business running smoothly.

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